Wednesday, May 31, 2006

Journals displayed in the Library Thursday 1 June 2006

  • Biochimica et Biophysica Acta: Proteins and Proteomics, May 2006, Volume 1764, Number 5
  • Blood, 1 May 2006, Volume 107, Number 9
  • Clinical Infectious Diseases, 15 May 2006, Volume 42, Number 10
  • Developmental Dynamics, May 2006, Volume 235, Number 5
  • FEBS Letters, 15 May 2006, Volume 580, Number 11
  • Journal of Immunology, 15 May 2006, Volume 176, Number 10
  • Journal of Molecular Evolution, April 2006, Volume 62, Number 4
  • Nature Immunology, June 2006, Volume 7, Number 6
  • Neuron, 4 May 2006, Volume 50, Number 3
  • Parasite Immunology, June 2006, Volume 28, Number 6
  • Science, 26 May 2006, Volume 312, Number 5777
  • Scientific American, May 2006, Volume 294, Number 5

Molecular Station

This is a new website for molecular biology http://www.molecularstation.com/.

It contains:
  • Protocols database
  • Bioinformatics databases
  • Molecular Biology wiki
  • Discussion forum

For ease of navigation it is divided into sections for: DNA, RNA, Proteins and Proteomics. It contains many links to good resources, but beware that this is obviously a work in progress as there are gremlins - like a blank space where you would expect the page content to be (between the navigation and the ads columns), scrolling down to the base of the page reveals the missing content.

Tuesday, May 30, 2006

Journals displayed in the Library Wednesday 31 May 2006

  • AIDS Research and Human Retroviruses, April 2006, Volume 22, Number 4
  • Biochemistry, 16 May 2006, Volume 45, Number 19
  • Biochimica et Biophysica Acta: Molecular and Cell Biology of Lipids, March 2006, Volume 1761, Number 3
  • BMJ, 27 May 2006, Volume 332, Number 7552
  • Cell, 5 May 2006, Volume 125, Number 3
  • Chinese Medical Journal, Volume 119, Number 5, 5 March, Number 6, 20 March, Number 7, 5 April, 2006
  • Developmental Cell, May 2006, Volume 10, Number 5
  • Immunity, January 2006, Volume 24, Number 1
  • Journal of Biochemistry, April 2006, Volume 139, Number 4
  • Journal of Infectious Diseases, 15 May 2006, Volume 193, Number 10
  • Journal of Molecular Biology, 26 May 2006, Volume 359, Number 1
  • Lancet, 27 May 2006, Volume 367, Number 9524
  • Molecular Cell, 23 November 2005, Volume 20, Number 4
  • Neuroscience, 2006, Volume 139, Number 3

Rejection letters

Civility costs nothing. But try telling that to the editors of academic journals whose rejection letters appear to be getting ruder, more sarcastic and increasingly scathing, writes Jessica Shepherd in the Times Higher. A straw poll of bruised academics by The Times Higher has uncovered some the most offensive rejection slips sent by journals.

One lecturer expressed his outrage after receiving the following response - on Christmas Eve: "This text speaks in an overtly technical language as if convinced that any text can be made 'academic' by using difficult technical terms in a highly complex grammatical structure."
Another candid response went as follows: "What all this might have to do with philosophy, let alone Martin Heidegger, remains unclear."

Another rejection sent to an academic by a Chinese economics journal has now become academic folklore. It reads: "We have read your manuscript with boundless delight. If we were to publish your paper it would be impossible for us to publish any work of a lower standard. And as it is unthinkable that in the next thousand years we shall see its equal, we are, to our regret, compelled to return your divine composition and beg you a thousand times to overlook our short sight and timidity."

This is an extract from the Times Higher, 19 May 2006.

Websites of the Month: Avian & Pandemic Influenza

Avian influenza and the potential threat of pandemic influenza in humans has lead to a leap in interest in influenza, with masses of news stories and information websites being produced worldwide, so here are two websites which aggregate resources.

Flu Wiki

The FLU Wiki is a resource started by an American writer, Melanie Mattson, aimed at providing reliable neutral information to inform public health authorities. The wiki is a collaborative project where readers may edit pages to include useful resources they have found (within the guidelines of the editorial policy ), so it is continuously evolving and updating.

http://www.fluwikie.com/

This wiki has sections for news (including blogrolls), science information (including sequences , epidemiological data and advice to patients), surveillance and contigency plans.

Avian and pandemic influenza: some resources

Keith Nockels (the Clinical Sciences Librarian) at Leicester University has also produced a web page of resources. This is periodically updated.

http://www.le.ac.uk/li/khn5/birdflu.html

Introduction to the Library

We are changing the way we organise Library induction tours. Starting from now, there will be a Library induction tour most Wednesday afternoons starting at 2.30pm. All new staff are encouraged to attend a Library induction.

The induction tour includes a walk around the main Library areas and an explanation of what is where, Library services and policies, plus an exploration of the NIMR Intranet and a brief look at the MRC Portal. Attendees will also be able to register with the Library at the end of the session.

You don't need to book - just turn up at the Library Main Desk.

If you are unable to attend on a Wednesday afternoon or have any other queries, please contact the Library on ext 2228.

Thursday, May 25, 2006

Journals displayed in the Library Tuesday 30 May 2006

  • Biochimica et Biophysica Acta: Biomembranes, February 2006, Volume 1758, Number 2
  • Blood, 15 May 2006, Volume 107, Number 10
  • Human Molecular Genetics, 15 April 2006, Volume 15, Review Issue 1
  • Human Molecular Genetics, 15 May 2006, Volume 15, Number 10
  • Journal of Physiology, 15 May 2006, Volume 573, Number 1
  • Journal of Structural Biology, May 2006, Volume 154, Number 2
  • Molecular Endocrinology, May 2006, Volume 20, Number 5
  • Nature, 25 May 2006, Volume 441, Number 7092
  • New Scientist, 27 May 2006, Volume 190, Number 2553
  • Nucleic Acids Research, 2006, Volume 34, Number 7
  • Proceedings of the Royal Society, 7 June 2006, Volume 273, Number 1592
  • Virology, 10 April 2006, Volume 347, Number 2

Wednesday, May 24, 2006

Journals displayed in the Library Thursday 25 May 2006

  • Biophysical Journal, 15 May 2006, Volume 90, Number 10
  • Developmental Biology, 1 May 2006, Volume 293, Number 1
  • Endocrinology, May 2006, Volume 147, Number 5
  • International Immunology, April 2006, Volume 18, Number 4
  • Journal of Computational Biology, March 2006, Volume 13, Number 2
  • Journal of Magnetic Resonance, April 2006, Volume 179, Number 2
  • Molecular Microbiology, May 2006, Volume 60, Number 4
  • Science, 19 May 2006, Volume 312, Number 5776

New Book

  • Annual Review of Physiology 68, edited by David L. Garbers, 2006

Tuesday, May 23, 2006

Journals displayed in the Library Wednesday 24 May 2006

  • Acta Crystallographica Section C: Crystal Structure Communications, May 2006, Volume 62, Number 5
  • American Journal of Tropical Medicine and Hygiene, May 2006, Volume 74, Number 5
  • Cell Motility and the Cytoskeleton, May 2006, Volume 63, Number 5
  • Clinical Infectious Diseases, 1 May 2006, Volume 42, Number 9
  • Current Science, 10 March 2006, Volume 90, Number 5
  • Development, May 2006, Volume 133, Number 9
  • European Journal of Immunology, May 2006, Volume 36, Number 5
  • Genome Research, May 2006, Volume 16, Number 5
  • Immunogenetics, May 2006, Volume 58, Number 4
  • Trends in Pharmacological Sciences, May 2006, Volume 27, Number 5

Update available for Endnote 9

An update has been issued for Endnote 9 on Windows computers. It can be obtained from: http://www.endnote.com/support/EN901_Win_updater.asp .

This update consist of a number of patches for known issues as well as some updated connection files.

Monday, May 22, 2006

Journals displayed in the Library Tuesday 23 May 2006

  • AIDS, 12 May 2006, Volume 20, Number 8
  • Bioinformatics, 15 May 2006, Volume 22, Number 10
  • Cell, 21 April 2006, Volume 125, Number 2
  • Critical Reviews in Biochemistry and Molecular Biology, March-April 2006, Volume 41, Number 2
  • Development, February 2006, Volume 133, Number 4
  • EMBO Journal, 17 May 2006, Volume 25, Number 10
  • Immunity, April 2006, Volume 24, Number 4
  • Journal of Cell Science, 1 May 2006, Volume 119, Number 9
  • Journal of Immunology, 1 May 2006, Volume 176, Number 9
  • Journal of Infectious Diseases, 1 May 2006, Volume 193, Number 9
  • Journal of Magnetic Resonance, March 2006, Volume 179, Number 1
  • Molecular Cell, 21 April 2006, Volume 22, Number 2
  • Neuron, 20 April 2006, Volume 50, Number 2
  • Neuroscience, 2006, Volume 139, Number 2
  • Structure, April 2006, Volume 14, Number 4
  • Trends in Parasitology, May 2006, Volume 22, Number 5

New Book

  • Novartis Foundation Symposium 276: Purinergic Signalling in Neuron-Glia Interactions, 2006

Report

  • Cancer Research UK Beatson Laboratories Scientific Report 2005

New customization feature in PubMed

When we have searched PubMed we are used to seeing our results presented on 2 tabs: All and Reviews. The technology behind the Reviews tab is a filter. PubMed has now made it possible for you to analyse your results by selecting filters to apply to your search results.

To customise the filters click on the hammer and wrench icon beside the Reviews tab, you will then be prompt to login to your account at MyNCBI (formerly Cubby - accounts are free and easy to set up as you create your own ID and password). Once logged in you are taken to Filter Selections which is broken down into 4 tabs:
  • Quick pick list - popular filters such as free full text, last 5 years. Select these by ticking the boxes
  • Browse contains a large number of filters in 3 groupings: Linkout, Links, Properties
  • Search - the ability to search for a filter by keyword in name or description
  • My Selections - the filters you have chosen to apply

The listings within Browse are quite extensive:

  • Linkout - options to link to resources provided by external organisations eg Molecular Biology Databases, Literature (includes ability to select by publisher such as Elsevier). As well as selecting to filter by these options you can also add an icon to records to facilitate their recognition in the results list
  • Links - options to select records with links to other Entrez databases such as Genes, PubMed Central archive
  • Properties - many of these are limit options.

You can set upto a maximum of 5 filters to be applied to your results.

Labels:

Friday, May 19, 2006

Journals displayed in the Library Monday 22 May 2006

  • Alternatives To Laboratory Animals [ ATLA ], May 2006, Volume 34, Number 2
  • BMJ, 20 May 2006, 20 May 2006, Volume 332, Number 7551
  • Current Biology, 9 May 2006, Volume 16, Number 9
  • Current Science, 25 February 2006, Volume 90, Number 4
  • Journal of Molecular Biology, 19 May 2006, Volume 358, Number 5
  • Journal of Neurophysiology, May 2006, Volume 95, Number 5
  • Journal of Neuroscience, 3 May 2006, Volume 26, Number 18
  • Journal of Parasitology, April 2006, Volume 92, Number 2
  • Journal of Structural Biology, April 2006, Volume 154, Number 1
  • Lancet, 20 May 2006, Volume 367, Number 9523
  • Proceedings of the National Academy of Sciences of the United States of America, 2 May 2006, Volume 103, Number 18
  • Trends in Neurosciences, May 2006, Volume 29, Number 5

Is the electronic journal archive secure?

There was a time, not so long ago, when "printed journal" was a tautology. All journals existed only in printed form. Since the early 1990s we have been grappling with the birth and growth of the electronic journal, now an unruly teenager. Just like other teenagers, the electronic journal has had a disruptive effect.

For centuries libraries and publishers have had stable roles: publishers produced information; libraries provided access to this information and kept it for ever. We knew that once we had purchased a subscription to a journal we just had to provide shelf space for it and it would be there when we (you) needed it. If there was a problem we knew that plenty of other libraries would also have copies and could help out.

In the electronic era this is all changed. We no longer purchase journals, we can only licence electronic access from the publisher, and we have to look very carefully at the terms and conditions of any licence we sign. When a journal changes publisher we may lose our rights to content that we thought was securely ours. However, the biggest worry has been the future - will the journals still be available in 10, 20, 50 years' time? Are the publishers, upon whom we rely for access, willing and able to take on the archival function that has for so long been the role of libraries?

Librarians have been asking this question for several years, with increasing insistence as online access has become dominant. There are now quite a number of answers emerging. As yet it is not clear which (if any) approach will be most effective. The leading contenders are outlined below.

National libraries have begun to tackle the problem. The British Library has a project with 200 journal publishers, and both the Dutch and Australian national libraries are archiving journals publsihed in their territories. The Dutch Library also offers services for some major global publishers. The US National Library of Medicine's PubMedCentral service archives about 220 journals from 40 publishers.

Some initiatives have come from the research library community, mainly originating in US university libraries. LOCKSS wins the prize for the worst acronym (Lots Of Copies Keeps Stuff Safe) but has a simple concept, viz that libraries use a variety of web-crawling software to make copies of journals they subscribe to, and then share these copies with a network of other libraries. This ensures that content a library subscribes to is almost always available regardless of any problems at the the publisher. More than 80 libraries are now using LOCKSS. Unfortunately large publishers are not so keen to cooperate with this project as it takes too much control away from the publisher. CLOCKSS (Community LOCKSS) is a project bringing together six libraries and twelve major publishers to establish a dark archive*.

Portico is a third-party archiving service with support from a number of major US library players and funders. Portico tries to preserve the intellectual content of the electronic journal as completely as possible. It preserves publishers' source files in addition to converting them to a recognised archival format. Again it is a dark archive. This initiative seems to be one of the better thought-out solutions to the problem, finding favour with publishers and libraries. The downside is that it will have an attached cost - participating publishers and libraries will need to contribute to its costs.

* Dark Archive. The purpose of a dark archive is to function as a repository for information that can be used as a failsafe during disaster recovery, or for preservation purposes, but it is not used for daily patron access. It is necessary to specify what trigger events will cause the dark archive to be made "light", i.e. acccessible.

Missing from the Library

  • BMJ dated 1 April 2006 [ Volume 332 Number 7544 ]
  • Bird flu written on cover - with cartoon of world traveling duck carrying a suitcase filled with H5N1
  • If you know the whereabouts of this journal please return to the Library.
  • Thank you

Thursday, May 18, 2006

Journals displayed in the Library Friday 19 May 2006

  • Biochimica et Biophysica Acta, May 2006, Volume 1762, Number 5
  • BioTechniques, May 2006, Volume 40, Number 5
  • Current Opinion in Immunology, June 2006, Volume 18, Number 3
  • FEBS Journal, May 2006, Volume 273, Number 10
  • Journal of Magnetic Resonance, May 2006, Volume 180, Number 1
  • Nature, 18 May 2006, Volume 441, Number 7091
  • NewScientist, 20 May 2006, Volume 190, Number 2552
  • Trends in Genetics, May 2006, Volume 22, Number 5

Methods in Cell Biology

Volumes of this book series have just been added to ScienceDirect. We can access vol 76 -78 (2004) via the link below:

http://www.sciencedirect.com/science/bookseries/0091679X

It is expected that more volumes will be added soon.

Wednesday, May 17, 2006

Journals displayed in the Library Thursday 18 May 2006

  • Biochimica et Biophysica Acta: General Subjects, May 2006, Volume 1760, Number 5
  • Genes and Development, 1 May 2006, Volume 20, Number 9
  • Jikeikai Medical Journal, March-December 2005, Volume 52, Numbers 1-4
  • Journal of Biomolecular NMR, April 2006, Volume 34, Number 4
  • Journal of Neuroscience, 26 April 2006, Volume 26, Number 17
  • Nature Structural and Molecular Biology, May 2006, Volume 13, Number 5
  • Protein Science, May 2006, Volume 15, Number 5
  • Science, 12 May 2006, Volume 312, Number 5775
  • Scientist, May 2006, Volume 20, Number 5
  • Trends in Immunology, May 2006, Volume 27, Number 5

New Computer Chairs

We have four new chairs for computer users in the Library's Main Reading Room. The chairs are adjustable and more mobile than our more traditional chairs, and are recommended for comouter users in order to help prevent back or neck aches. If you are using a Laptop, you may find it more comfortable to use one of these chairs.

Tuesday, May 16, 2006

Journals displayed in the Library Wednesday 17 May 2006

  • Biochemistry, 9 May 2006, Volume 45, Number 18
  • Biochimica et Biophysica Acta: Gene Structure and Expression, January/February 2006, Volume 1759, Numbers 1-2
  • Biochimica et Biophysica Acta: Reviews on Cancer, April 2006, Volume 1765, Number 2
  • Current Medical Research, April 2006, Volume 22, Number 4
  • Developmental Biology, 15 April 2006, Volume 292, Number 2
  • Journal of Molecular Evolution, March 2006, Volume 62, Number 3
  • Neuroscience, 2006, Volume 139, Number 1
  • Trends in Biotechnology, May 2006, Volume 24, Number 5

Why pay open access fees?

Open access brings more citations, apparently, reports The Scientist.

Open Access publishing* has developed mainly since 2000, when Biomedcentral (BMC) started publishing, using the new OA publishing business model. Under this model access to all articles is free but authors are charged a publication (or dissemination) fee. BMC started a large number of titles simultaneously some of which have thrived although some of their titles occupy lower niches in the hierarchy. They were followed by OA publishers Public Library of Science (PLoS) who have explicitly gone for quality papers. Many other OA titles now exist - the Directory of Open Access Journals contains over 2000 titles - including established journals from traditional publishers. Oxford University Press and Nature Publishing Group (NPG) both have at least one fully OA title.

Some other publishers have adopted a more cautious approach by adopting a hybrid approach. Under this model readers need a subscription as normal to view most articles in a journal, unless the author has opted to pay an OA fee to make access open. Springer and Blackwells are two big publishers to adopt this model, along with Company of Biologists and PNAS. OUP also have a number of hybrid titles. From 2007 the EMBO Journal and the British Journal of Pharmacology (both published by NPG) will become hybrid.

Clearly if you want to publish in a journal that is fully OA then you will have to pay their maunscript charge. If you publish in a hybrid OA journal you have the choice to pay or not to pay. Why would you choose to pay such an optional charge?

  • Increased access - to ensure that there are no subscription barriers to anyone reading your article
  • Increased impact - there is a growing body of evidence that OA affects the citation rate of an article (see article about PNAS experience)
  • Importance of the work - because you believe this article is so important that it should receive the maximum readership
  • Ideological reasons - because you believe OA is a good thing in and of itself

It's not clear whether the hybrid model will be the way to successfully bridge from today's world of subscription charges to a tomorrow's world of dissemination charges, or whether it is the road to nowhere. Many see full OA journals and author self-archiving as more realistic routes to change.

* For an overview of what Open Access is.

Labels:

Monday, May 15, 2006

Journals Displayed in the Library - Tuesday 16th May 2006

  • Acta Crystallographica, Section A, May 2006, Vol.62(3)
  • Acta Medica Okayama, April 2006, Vol.60(2)
  • Biochemical Journal, 15th May 2006, Vol.396(1)
  • Blood, 15th April 2006, Vol.107(8)
  • Current Biology, 18th April 2006, Vol.16(8)
  • Journal of Antibiotics, February 2006, Vol.59(2)
  • Journal of Medical and Dental Sciences, March 2006, Vol.53(1)
  • Journal of Molecular Biology, 12th May 2006, Vol.358(4)
  • Molecular and Biochemical Parasitology, June 2006, Vol.147(2)
  • Proceedings of the National Academy of Sciences, USA, 25th April 2006, Vol.103(17)
  • Revista de Patologia Tropical, January-July 2006, Vol.35 Suppl.1
  • Transactions of the Royal Society of Tropical Medicine and Hygiene, June 2006, Vol.100(6)

Friday, May 12, 2006

Did you know?

Nature Publishing Group (NPG) serve up twelve million electronic tables of contents per month via email. If you want to make it twelve million and one then register with nature.com and you can choose to receive TOC alerts from any NPG title. Alternatively you may want to receive new contents information regularly via RSS feeds from NPG. See Blog for 12th April on RSS feeds.

Shared bookmarking

Connotea is a free website to help researchers manage and share information. It allows you to save links to all your favourite articles, references, websites and other online resources with one click. While you can bookmark anything on the web with Connotea, it is primarily intended to allow you to save links to references so it offers special functionality for bookmarking academic papers and books. Because it is web-based you can access it from anywhere in the world, and you can save articles with one click, without interrupting what you are doing and without needing to re-type the bibliographic information. It is compatible with Endnote and Reference Manager, allowing you to easily export references to those programs.

Connotea is also a social bookmarking tool, so you can view other people's collections to discover new, interesting content.

Try it for yourself here:
http://www.connotea.org/

Journals Displayed in the Library Monday 15 May 2006

  • Acta Crystallographica Section D: Biological Crystallography, May 2006, Volume 62, Number 5
  • Biochemistry, 2 May 2006, Volume 45, Number 17
  • Biochimica et Biophysica Acta: Proteins and Proteomics, April 2006, Volume 1764, Number 4
  • BMJ, 13 May 2006, Volume 332, Number 7550
  • Gene Therapy, May 2006, Volume 13, Number 10
  • Genetics, April 2006, Volume 172, Number 4
  • Lancet, 13 May 2006, Volume 367, Number 9522
  • Molecular Biology of the Cell, May 2006, Volume 17, Number 5
  • Science, 5 May 2006, Volume 312, Number 5774
  • Virology, 30 March 2006, Volume 347, Number 1

Thursday, May 11, 2006

Journals displayed in the Library Friday 12 May 2006

  • Infection and Immunity, August 2005, Volume 73, Number 8
  • Journal of Bacteriology, July 2005, Volume 187, Number 14
  • Journal of Endocrinology, May 2006, Volume 189, Number 2
  • Journal of Virology, July 2005, Volume 79, Number 14
  • Nature, 11 May 2006, Volume 441, Number 7090
  • New Scientist, 13 May 2006, Volume 190, Number 2551

Wednesday, May 10, 2006

Journals displayed in the Library Thursday 11 May 2006

  • BioEssays, May 2006, Volume 28, Number 5
  • Development, April 2006, Volume 133, Number 8
  • Journal of Biomolecular NMR, March 2006, Volume 34, Number 3
  • Journal of Cell Science, 15 April 2006, Volume 119, Number 8
  • Journal of Medical and Dental Sciences, December 2005, Volume 52, Number 4
  • Molecular Genetics and Genomics, April 2006, Volume 275, Number 4
  • Sapporo Medical Journal, December 2005, Volume 74, Numbers 5-6
  • Scientist, March 2006, Volume 20, Number 3

Books added to the Library

  • Annual Review of Medicine 57, 2006
  • Annual Review of Pharmacology and Toxicology 46, 2006
  • Davis, Mike. The Monster at Our Door: The Global Threat of Avian Flu, 2005
  • The Laboratory Rat, 2nd edition, edited by Mark A. Suckow, Steven H. Weisbroth and Craig L. Franklin, 2006
  • The RNA World, 3rd edition, edited by Raymond F. Gesteland, Thomas R. Cech and John F. Atkins, 2006
  • Novartis Foundation 270: Percept, Decision, Action: Bridging the Gaps, 2006
  • Novartis Foundation Symposium 272: Signalling Pathways in Acute Oxygen Sensing, edited by Derek J. Chadwick and Jamie Goode, 2006
  • Warren F. Walker, Jr and Dominique G. Homberger. Anatomy and Dissection of the Rat, 3rd edition, 1997
  • Warren F. Walker, Jr. Dissection of the Frog, 2nd edition, 1998

Labels:

More changes in PubMed

From this month PubMed is changing the order in which authors appear in its records to truly reflect that appearing on the published papers. This change particularly affects Corporate or Group authors.

To summarise how these authors have been handled in the past:
1966-1999 : Corporate author(s) placed at the end of article title, so need to search [ti] field to find them.
2000-Apr 2006: Corporate author(s) entered in separate field and always displayed last in the list of authors. Use field code [cn] to search for these.
May 2006 - : Corporate author(s) entered in separate field and displayed in the order found in the byline of the published article. Use field code [cn] to search for these.

For further details see the article in the NLM Technical Bulletin No 350 : May/June 2006
http://www.nlm.nih.gov/pubs/techbull/mj06/mj06_corp_author.html

Labels:

Tuesday, May 09, 2006

Patient Information website from BMJ

BMJ has launched a new website of patient information based on clinical evidence, called Best Treatments. It aims to provide information on medical conditions, treatments, clinical investigations and operations in plain jargon free English.

Doctors can also use the site to get links to enteries from Clinical Evidence with links to the appropriate articles in the scientific literature, such as clinical trials.

For more information see the news item on BBC website: http://news.bbc.co.uk/1/hi/health/4753295.stm

URL for Best Treatments: http://www.besttreatments.co.uk/btuk/home.jsp

Journals displayed in the Library Wednesday 10 May 2006

  • Bioinformatics, 1 May 2006, Volume 22, Number 9
  • EMBO Reports, May 2006, Volume 7, Number 5
  • FEBS Letters, 1 May 2006, Volume 580, Number 10
  • Journal of Neuroscience, 19 April 2006, Volume 26, Number 16
  • Keio Journal of Medicine, March 2006, Volume 55, Number 1
  • Mammalian Genome, April 2006, Volume 17, Number 4
  • Nucleic Acids Research, 2006, Volume 34, Number 6
  • Progress in Nuclear Magnetic Resonance Spectroscopy, 2006, Volume 48, Number 1
  • Protein Engineering Design and Selection, May 2006, Volume 19, Number 5
  • Scientist, February 2006, Volume 20, Number 2

Monday, May 08, 2006

Journals displayed in the Library Tuesday 9 May 2006

  • Biochemistry, 25 April 2006, Volume 45, Number 16
  • Biochimica et Biophysica Acta: Molecular Cell Research, March 2006, Volume 1763, Number 3
  • EMBO Journal, 3 May 2006, Volume 25, Number 9
  • Genes and Development, 1 April 2006, Volume 20, Number 7
  • Journal of Antibiotics, January 2006, Volume 59, Number 1
  • Journal of Medical and Dental Sciences, September 2005, Volume 52, Number 3
  • Journal of Neuroscience, 12 April 2006, Volume 26, Number 15
  • Nature Immunology, May 2006, Volume 7, Number 5
  • Proceedings of the National Academy of Sciences of the United States of America, 18 April 2006, Volume 103, Number 16
  • Scientist, January 2006, Volume 20, Number 1

Friday, May 05, 2006

Journals displayed inn the Library Monday 8 May 2006

  • American Scientist, May-June 2006, Volume 94, Number 3
  • Biochemistry, 7 May 2006, Volume 45, Number 9
  • Biochimica et Biophysica Acta: Bioenergetics, March 2006, Volume 1757, Number 3
  • BMJ, 6 May 2006, Volume 332, Number 7549
  • Developmental Biology, 1 April 2006, Volume 292, Number 1
  • Genes and Development, 15 April 2006, Volume 20, Number 8
  • Journal of Molecular Biology, 5 May 2006, Volume 358, Number 3
  • Lancet, 6 May 2006, Volume 367, Number 9521
  • Proceedings of the Royal Society B, 22 May 2006, Volume 273, Number 1591
  • Revista da Sociedade Brasileira de Medicina Tropical, March-April 2006, Volume 39, Number 2

New Books

  • Biographical Memoirs of Fellows of The Royal Society 51, 2005
  • Hanson, Elizabeth. Achievements [of The Rockefeller University]: A Century of Science for the Benefit of Humankind 1901-2001, 2000

Thursday, May 04, 2006

Journals Displayed in the Library Friday 5 May 2006

  • Biochimica et Biophysica Acta: General Subjects, April 2006, Volume 1760, Number 4
  • Human Molecular Genetics, 1 May 2006, Volume 15, Number 9
  • Journal of Physiology, 1 May 2006, Volume 572, Number 3
  • Memórias do Instituto Oswaldo Cruz, March 2006, Volume 101, Number 2
  • Molecular and Biochemical Parasitology, May 2006, Volume 147, Number 1
  • Nature, 4 May 2006, Volume 441, Number 7089
  • NewScientist, 6 May 2006, Volume 190, Number 2550
  • Nucleic Acids Research, 2006, Volume 34, Number 5

New Books

  • Biochemical Society Symposium 73: Transcription, edited by S.G.E. Roberts, R.O.J. Weinzierl and R.J. White, 2006
  • McClave, James T. and Sincich, Terry. Statistics 10th edition, 2006
  • Wellcome Witnesses to Twentieth Century Medicine 17: Genetic Testing, edited by D.A. Christie and E.M. Tansey, 2003

Listen to the words

The Web grew out of the world of research and has become a fixture of popular culture. Now popular culture is giving something back to research, in the form of the Podcast. In essence a podcast is just a sound file that you can listen to on a computer or on an MP3 player such as an iPod. (See Wikipedia entry for podcast for more detail). Some scientific publishers are starting to use this technology. The added value of a podcast is that you can subscribe and be alerted on a regular basis, using RSS (see Blog entry for April 11th).
  • Nature's weekly podcast features highlights from news and articles published in Nature, including interviews with the people behind the science. It started in October as an experiment and Nature suddenly found they were regularly in the iTunes top 50, with an average of 20,000 downloads per week.
  • Science's offering is twice a month, badged as a pilot service. It is built around interesting stories in the journal and on its sister sites.
  • The Scientist also has a weekly podcast "The Week" which takes a comprehensive look at the important stories shaping the life sciences over the last 7 days.
  • The Royal Society have both audio and video podcasts of some of their major lectures.
  • On the medical side, the New England Journal of Medicine has an audio summary of each issue, and a number of audio interviews.
  • Both New Scientist and Scientific American have established weekly podcasts too.
On the more general media side, the BBC Radio 4 science output is also available on the listen again service while The Guardian also makes a science podcast available.

Podcast.net has a useful directory of other science and health related podcasts.

FELICS - Bioinformatics databases for free

FELICS (Free European Life-science Information and Computation Services) is a new EU funded project to make bioinformatics databases available for free to European scientists. Launched today by a partnership of EMBL's EBI, the Swiss Institute for Bioinformatics, the University of Cologne and the European Patent Office.

The project will build on the EMBL Data Library and will develop, enhance and interlink data resources. It will include many of EBI's familiar databases and add:
  • BRENDA (University of Cologne's enzyme database previously available only on licence)
  • Information from patent literature to create CheBI (chemical entities of biological interest)

For further information see EMBL's press release

Wednesday, May 03, 2006

Journals displayed in the Library - Thursday 4 May 2006

  • Biochemical Journal, 1 May 2006, Volume 395, Number 3
  • Chinese Medical Journal, 5 February 2006, Volume 119, Number 3
  • FEBS Journal, May 2006, Volume 273, Number 9
  • Gene Therapy, May 2006, Volume 13, Number 9
  • Immunology, May 2006, Volume 118, Number 1
  • Journal of Molecular Biology, 28 April 2006, Volume 358, Number 2
  • Molecular Pharmacology, May 2006, Volume 69, Number 5
  • Parasite Immunology, May 2006, Volume 28, Number 5
  • Proceedings of the Royal Society, 7 May 2006, Volume 273, Number 1590
  • Proteins: Structure, Function, and Bioinformatics, 15 May 2006, Volume 63, Number 3

Thesis

  • Farnaz Fallah-Arani (Division of Immune Cell Biology), The role of Syk-family protein tyrosine kinases in B cell development.

Analysis of data on scholarly journals publishing

The Research Information Network, Research Councils UK (RCUK) and the Department of Trade and Industry have commissioned an analysis of available data on scholarly journals publishing. This study got off the ground in mid-April 2006 and should conclude by the middle of summer. The aim is to assist in UK domestic policy-making, by reviewing information about scholarly journal publishing, assessing the data available about the process and the reliability of that data.
http://www.rin.ac.uk/?q=data-scholarly-journals

Some commentators take this as evidence that RCUK is fudging its Open Access policy - first announced June 2005 after a long delay, but still not confirmed after a consultation period.

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Free Access to People's Archive

People's Archive has made available free web access to the video life stories of some of the world great thinkers, creators and achievers. Currently some 29 life stories are available as Quicktime videos (small format only for free), audio files, word accurate transcripts and written biographies. Links to external websites are also provided.

For ease of navigation the archive is divided in 5 sections (Science, Medicine, Film, Masters and Literature).

The Science section is the most populous with 16 life stories including:
  • Syndey Brenner - biologist
  • Francis Crick- biologist
  • John Maynard Smith - biologist
  • Avrion Mitchison - immunologist
  • François Jacob -biochemist

Not all the life stories are available for free, those requiring a subscription are clearly marked (eg immunologist Jan Klein).

Tuesday, May 02, 2006

Journals displayed in the Library - Wednesday 3 May 2006

  • American Journal of Tropical Medicine and Hygiene, April 2006, Volume 74, Number 4
  • Biochemistry, 18 April 2006, Volume 45, Number 15
  • Cell, 7 April 2006, Volume 125, Number 1
  • Developmental Cell, April 2006, Volume 10, Number 4
  • European Journal of Neuroscience, April 2006, Volume 23, Number 8
  • Immunogenetics, April 2006, Volume 58, Numbers 2-3
  • Journal of Clinical Endocrinology and Metabolism, April 2006, Volume 91, Number 4
  • Molecular Cell, 7 April 2006, Volume 22, Number 1
  • Nagoya Journal of Medical Science, January 2006, Volume 68, Numbers 1-2
  • Science, 28 April 2006, Volume 312, Number 5773

Growing pains at BioMedCentral

Open access publisher BioMedCentral (BMC) is facing a potential revolt from a number of the editors at its independent journals, who are upset with how the journals are being managed. Several editors of the 93 independent journals published by BMC have told The Scientist that they are considering taking their journals to other publishers.
http://www.the-scientist.com/news/display/23352/

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